BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020C02LP1|AL427588
(1118 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1757 1810 0.0
>3x_Contig1757
Length = 24754
Score = 1810 bits (907), Expect = 0.0
Identities = 1033/1063 (97%), Gaps = 16/1063 (1%)
Strand = Plus / Plus
Query: 6 aggttagcgttccattaggatkttctgcttcaattcgaatataaatctcctgtgaagaga 65
||||||||||||||||||||| | | || |||||||||||||||||||||||| ||||||
Sbjct: 26 aggttagcgttccattaggatctcc-gcctcaattcgaatataaatctcctgt-aagaga 83
Query: 66 gagttatcggatcwtgacgaagatgataaggagcyagaggagccattggtaccgactcaa 125
||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 84 gagttatcggatcttgacgaagatgataaggagccagaggagccattggtaccgactcaa 143
Query: 126 tcgtacccgttcatgggaataaaccggtcaaggactagcttgagttcatygccagagaaa 185
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 144 tcgtacccgttcatgggaataaaccggtcaaggactagcttgagttcatcgccagagaaa 203
Query: 186 cgcacgcagacagtagaatcgagtccaataccaataactgcaaccagtgatgccgtacca 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 cgcacgcagacagtagaatcgagtccaataccaataactgcaaccagtgatgccgtacca 263
Query: 246 gatgaaggaaacacatctgaagaggacactgatttgacagacacaggaatgtgaagtact 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gatgaaggaaacacatctgaagaggacactgatttgacagacacaggaatgtgaagtact 323
Query: 306 gtatcaactatatcacgtgacatgaaaagatataacggcacttagagcttgcaggcaact 365
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 324 gtatcaactatatcacgtgacatgaaaagatataacggcactcagagcttgcaggcaact 383
Query: 366 tgtacgtatatagaataaagccctatgtatacacttaaacgtcttcaccggggaatgtct 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tgtacgtatatagaataaagccctatgtatacacttaaacgtcttcaccggggaatgtct 443
Query: 426 gctgttcaagccgagattttctattccatatatgtcggatcccaaaccttctgcaatacg 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gctgttcaagccgagattttctattccatatatgtcggatcccaaaccttctgcaatacg 503
Query: 486 gaagcagaaacaagaaaaagagaaaagagaaaaagacaaagtttctactcgacatctgca 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gaagcagaaacaagaaaaagagaaaagagaaaaagacaaagtttctactcgacatctgca 563
Query: 546 ctgccctcaaacattcttcctcatcactttgtcactcgtatttagtctaaactatatttg 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ctgccctcaaacattcttcctcatcactttgtcactcgtatttagtctaaactatatttg 623
Query: 606 ccttacaatctacaattcacacaaatgtcactttacaagctgtaaaccacatgccgttca 665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ccttacaatctacaattcacacaaatgtcactttacaagctgtaaaccacatgccgttca 683
Query: 666 actaatgcactatataaagagaaacaaagagacgtaaaaagacgtaaacacgggatacaa 725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 actaatgcactatataaagagaaacaaagagacgtaaaaagacgtaaacacgggatacaa 743
Query: 726 ttcaccagtacatattcccccaaaccagccaactctcacttctcacctctcccctgctac 785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 ttcaccagtacatattcccccaaaccagccaactctcacttctcacctctcccctgctac 803
Query: 786 atcttgcttcgcattctgctcggaatctcttctttcaagccccatttagttcctattcga 845
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 atcttgcttcgcattctgctcggaatctcttctttcaagccccatttagttcctattcga 863
Query: 846 tctcgcatttccatactggaaaagaccagttttgaaag-tttcaagttctcgaagaag-a 903
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
Sbjct: 864 tctcgcatttccatactggaaaagaccagttttgaaagttttcaagttctcgaagaagaa 923
Query: 904 aaaaaaatcaac-aaaaactgaaaactcgaaacattcacatagtgttttcagattggca- 961
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 924 aaaaaaatcaacaaaaaactgaaaactcgaaacattcacatagtgttttcagattggcac 983
Query: 962 cmcttcgtcttg-aaggtwaagg-twaatataggcta-tyagactaa-caca-cagtggk 1016
| |||||||||| ||||| |||| | ||||||||||| | ||||||| |||| ||||||
Sbjct: 984 cacttcgtcttgaaaggtaaaggttaaatataggctattcagactaatcacaccagtggt 1043
Query: 1017 ggtttt--ctataaacga-tggagtgta--ccaatcmcttttt 1054
|||||| ||||||||| ||||||||| |||||| ||||||
Sbjct: 1044 ggtttttcttataaacgattggagtgtaacccaatcacttttt 1086
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8779
Number of Sequences: 1807
Number of extensions: 8779
Number of successful extensions: 79
Number of sequences better than 1.0e-20: 1
length of query: 1118
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1102
effective length of database: 10,329,639
effective search space: 11383262178
effective search space used: 11383262178
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.3 bits)